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  5. LOC_Os04g41229.1

LOC_Os04g41229.1


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0018567 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0018567_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g41229.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g41229.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_87
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_50


Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011598 bHLH_dom SMART 297 347
IPR011598 bHLH_dom ProSiteProfiles 291 341
IPR045239 bHLH95_bHLH CDD 296 348
IPR011598 bHLH_dom Pfam 296 342
IPR036638 HLH_DNA-bd_sf Gene3D 292 365
IPR036638 HLH_DNA-bd_sf SUPERFAMILY 294 357

No CAZYmes available for this sequence

No external refs found!