1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g42090.3

LOC_Os04g42090.3


Description : Adenosylmethionine decarboxylase family protein


Gene families : OG_01_0007898 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007898_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g42090.3
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g42090.3
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_169
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_207


Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity ISM GOs from InterProScan
BP GO:0006597 spermine biosynthetic process ISM GOs from InterProScan
BP GO:0008295 spermidine biosynthetic process ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016067 S-AdoMet_deCO2ase_core SUPERFAMILY 20 342
IPR018166 S-AdoMet_deCO2ase_CS ProSitePatterns 72 82
IPR001985 S-AdoMet_decarboxylase_euk TIGRFAM 17 345
IPR001985 S-AdoMet_decarboxylase_euk PIRSF 3 351
IPR001985 S-AdoMet_decarboxylase_euk Pfam 16 342
IPR001985 S-AdoMet_decarboxylase_euk PANTHER 6 394

No CAZYmes available for this sequence

No external refs found!