LOC_Os04g42460.1

Description : GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain

Gene families : OG_01_0033370 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0033370_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g42460.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_213

Type	GO Term	Name	Evidence	Source
BP	GO:0000390	spliceosomal complex disassembly	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
BP	GO:0032988	protein-RNA complex disassembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0071826	protein-RNA complex organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR022783	GCFC_dom	Pfam	298	386
IPR000467	G_patch_dom	SMART	29	75
IPR045211	TFP11/STIP/Ntr1	PANTHER	2	260
IPR045211	TFP11/STIP/Ntr1	PANTHER	302	387
IPR000467	G_patch_dom	Pfam	31	73
IPR000467	G_patch_dom	ProSiteProfiles	31	77

No CAZYmes available for this sequence

External Links

No external refs found!