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  5. LOC_Os04g42980.1

LOC_Os04g42980.1


Description : Zinc finger (C3HC4-type RING finger) family protein


Gene families : OG_01_0010210 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010210_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g42980.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g42980.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_309
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_112


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001841 Znf_RING SMART 93 136
IPR002035 VWF_A SMART 273 457
IPR036465 vWFA_dom_sf SUPERFAMILY 271 458
IPR001841 Znf_RING Pfam 93 122
IPR002035 VWF_A Pfam 275 455
IPR032838 Vwaint_dom Pfam 622 693
IPR036465 vWFA_dom_sf Gene3D 275 459
IPR013083 Znf_RING/FYVE/PHD Gene3D 78 147
IPR002035 VWF_A ProSiteProfiles 275 458
IPR001841 Znf_RING ProSiteProfiles 93 137

No CAZYmes available for this sequence

No external refs found!