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  5. LOC_Os04g44710.1

LOC_Os04g44710.1


Description : C-terminal domain phosphatase-like 1


Gene families : OG_01_0002895 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002895_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g44710.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g44710.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_83
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_67


Type GO Term Name Evidence Source
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity ISM GOs from InterProScan
BP GO:0070940 obsolete dephosphorylation of RNA polymerase II C-terminal domain ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004274 FCP1_dom SMART 134 308
IPR014720 dsRBD_dom ProSiteProfiles 761 830
IPR004274 FCP1_dom ProSiteProfiles 73 324
IPR014720 dsRBD_dom SMART 636 700
IPR014720 dsRBD_dom SMART 762 829
IPR023214 HAD_sf Gene3D 67 326
IPR014720 dsRBD_dom ProSiteProfiles 664 701
IPR039189 Fcp1 PANTHER 1 776
IPR036412 HAD-like_sf SUPERFAMILY 67 324
IPR004274 FCP1_dom Pfam 190 298

No CAZYmes available for this sequence

No external refs found!