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  5. LOC_Os04g46530.1

LOC_Os04g46530.1


Description : delta tonoplast integral protein


Gene families : OG_01_0032838 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0032838_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g46530.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g46530.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_312
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_162


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
MF GO:0015267 channel activity ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036875 Znf_CCHC_sf SUPERFAMILY 383 420
IPR023271 Aquaporin-like Gene3D 1 106
IPR000425 MIP Pfam 1 90
IPR001878 Znf_CCHC ProSiteProfiles 400 415
IPR023271 Aquaporin-like SUPERFAMILY 2 100
IPR034294 Aquaporin_transptr PANTHER 2 101
IPR000425 MIP PRINTS 36 58
IPR000425 MIP PRINTS 3 21
IPR000425 MIP PRINTS 73 93

No CAZYmes available for this sequence

No external refs found!