LOC_Os04g47280.1

Description : alpha-L-fucosidase 1

Gene families : OG_01_0010780 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010780_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g47280.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g47280.1	No neighbors in network
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_368

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004560	alpha-L-fucosidase activity	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0015928	fucosidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000933	Glyco_hydro_29	PANTHER	11	506
IPR000933	Glyco_hydro_29	SMART	26	380
IPR000933	Glyco_hydro_29	Pfam	76	338
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	33	340
IPR008979	Galactose-bd-like_sf	SUPERFAMILY	347	467

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH29	346	518	4.5e-78	44	339

External Links

No external refs found!