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  5. LOC_Os04g47870.1

LOC_Os04g47870.1


Description : Stabilizer of iron transporter SufD / Polynucleotidyl transferase


Gene families : OG_01_0000015 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000015_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g47870.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g47870.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_366
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_123


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR024357 Argonaut_Gly-rich Pfam 136 237
IPR032474 Argonaute_N Pfam 256 394
IPR032472 ArgoL2 Pfam 596 642
IPR045246 Piwi_ago-like CDD 614 1066
IPR014811 ArgoL1 Pfam 404 454
IPR003100 PAZ_dom ProSiteProfiles 456 570
IPR003165 Piwi SMART 746 1067
IPR032473 Argonaute_Mid_dom Pfam 653 727
IPR036085 PAZ_dom_sf SUPERFAMILY 259 607
IPR003165 Piwi ProSiteProfiles 746 1067
IPR003100 PAZ_dom SMART 460 592
IPR003100 PAZ_dom Pfam 460 585
IPR036397 RNaseH_sf Gene3D 815 1118
IPR014811 ArgoL1 SMART 403 455
IPR012337 RNaseH-like_sf SUPERFAMILY 741 1067
IPR003165 Piwi Pfam 747 1066

No CAZYmes available for this sequence

No external refs found!