LOC_Os04g48400.1

Description : Glucose-methanol-choline (GMC) oxidoreductase family protein

Gene families : OG_01_0001074 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001074_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g48400.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g48400.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_82

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	ISM	GOs from InterProScan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000172	GMC_OxRdtase_N	Pfam	49	322
IPR036188	FAD/NAD-bd_sf	Gene3D	49	569
IPR036188	FAD/NAD-bd_sf	SUPERFAMILY	48	578
IPR012132	GMC_OxRdtase	PIRSF	23	586
IPR007867	GMC_OxRtase_C	Pfam	425	570
IPR000172	GMC_OxRdtase_N	ProSitePatterns	281	295

No CAZYmes available for this sequence

External Links

No external refs found!