LOC_Os04g49310.1

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG_01_0001318 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001318_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g49310.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g49310.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_166
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_195

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	ISM	GOs from InterProScan
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR041677	DNA2/NAM7_AAA_11	Pfam	107	201
IPR041677	DNA2/NAM7_AAA_11	Pfam	480	525
IPR045055	DNA2/NAM7-like	PANTHER	4	581
IPR027417	P-loop_NTPase	SUPERFAMILY	106	637
IPR045055	DNA2/NAM7-like	PANTHER	575	637
IPR041679	DNA2/NAM7-like_C	Pfam	533	583
IPR027417	P-loop_NTPase	Gene3D	554	657
IPR027417	P-loop_NTPase	Gene3D	37	553

No CAZYmes available for this sequence

External Links

No external refs found!