LOC_Os04g49570.2

Description : glutamate receptor 3.3

Gene families : OG_01_0005747 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005747_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g49570.2
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g49570.2
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_299
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_32

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	ISM	GOs from InterProScan
CC	GO:0016020	membrane	ISM	GOs from InterProScan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001320	Iontro_rcpt_C	SMART	470	811
IPR001638	Solute-binding_3/MltF_N	Pfam	478	809
IPR044440	GABAb_receptor_plant_PBP1	CDD	31	424
IPR017103	Iontropic_Glu_rcpt_pln	PIRSF	1	937
IPR001320	Iontro_rcpt_C	Pfam	810	845
IPR001828	ANF_lig-bd_rcpt	Pfam	48	406
IPR028082	Peripla_BP_I	SUPERFAMILY	25	460

No CAZYmes available for this sequence

External Links

No external refs found!