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  5. LOC_Os04g51520.1

LOC_Os04g51520.1


Description : xyloglucan endotransglycosylase 6


Gene families : OG_01_0001049 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001049_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g51520.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g51520.1 No neighbors in network
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_179


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
CC GO:0005618 cell wall ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
BP GO:0006073 obsolete cellular glucan metabolic process ISM GOs from InterProScan
BP GO:0010411 xyloglucan metabolic process ISM GOs from InterProScan
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity ISM GOs from InterProScan
BP GO:0042546 cell wall biogenesis ISM GOs from InterProScan
CC GO:0048046 apoplast ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016455 XTH CDD 31 311
IPR016455 XTH PIRSF 5 316
IPR008263 GH16_AS ProSitePatterns 115 125
IPR044791 Beta-glucanase/XTH PANTHER 11 317
IPR013320 ConA-like_dom_sf SUPERFAMILY 33 315
IPR000757 GH16 ProSiteProfiles 1 229
IPR000757 GH16 Pfam 37 221
IPR010713 XET_C Pfam 269 311

No CAZYmes available for this sequence

No external refs found!