LOC_Os04g52210.1

Description : Terpenoid cyclases/Protein prenyltransferases superfamily protein

Gene families : OG_01_0001132 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001132_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g52210.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g52210.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_22
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_45

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0010333	terpene synthase activity	ISM	GOs from InterProScan
BP	GO:0016101	diterpenoid metabolic process	None	Extended
BP	GO:0016102	diterpenoid biosynthetic process	ISM	GOs from InterProScan
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
MF	GO:0016829	lyase activity	ISM	GOs from InterProScan
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR008949	Isoprenoid_synthase_dom_sf	Gene3D	415	723
IPR001906	Terpene_synth_N	Pfam	187	382
IPR008930	Terpenoid_cyclase/PrenylTrfase	SUPERFAMILY	33	203
IPR008949	Isoprenoid_synthase_dom_sf	SUPERFAMILY	398	707
IPR005630	Terpene_synthase_metal-bd	Pfam	409	665
IPR008930	Terpenoid_cyclase/PrenylTrfase	SUPERFAMILY	197	403
IPR036965	Terpene_synth_N_sf	Gene3D	31	404
IPR044814	Terpene_cyclase_plant_C1	CDD	227	709

No CAZYmes available for this sequence

External Links

No external refs found!