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  5. LOC_Os04g52710.1

LOC_Os04g52710.1


Description : imidazoleglycerol-phosphate dehydratase


Gene families : OG_01_0008676 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008676_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g52710.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g52710.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_374
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_196


Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process ISM GOs from InterProScan
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000807 ImidazoleglycerolP_deHydtase PANTHER 56 269
IPR038494 IGPD_sf Gene3D 161 269
IPR000807 ImidazoleglycerolP_deHydtase Pfam 102 245
IPR000807 ImidazoleglycerolP_deHydtase CDD 75 266
IPR020565 ImidazoleglycerP_deHydtase_CS ProSitePatterns 132 145
IPR000807 ImidazoleglycerolP_deHydtase Hamap 73 266
IPR038494 IGPD_sf Gene3D 62 160
IPR020568 Ribosomal_Su5_D2-typ_SF SUPERFAMILY 73 157
IPR020565 ImidazoleglycerP_deHydtase_CS ProSitePatterns 227 239
IPR020568 Ribosomal_Su5_D2-typ_SF SUPERFAMILY 158 250

No CAZYmes available for this sequence

No external refs found!