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  5. LOC_Os04g53170.1

LOC_Os04g53170.1


Description : global transcription factor group E7


Gene families : OG_01_0007815 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007815_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g53170.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g53170.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_353
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_85


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001487 Bromodomain PRINTS 185 204
IPR001487 Bromodomain PRINTS 151 167
IPR001487 Bromodomain PRINTS 167 185
IPR027353 NET_dom ProSiteProfiles 264 345
IPR036427 Bromodomain-like_sf Gene3D 13 231
IPR001487 Bromodomain ProSiteProfiles 132 204
IPR036427 Bromodomain-like_sf SUPERFAMILY 102 227
IPR001487 Bromodomain Pfam 124 204
IPR037377 GTE_bromo CDD 120 218
IPR038336 NET_sf Gene3D 267 345
IPR001487 Bromodomain SMART 117 223
IPR027353 NET_dom Pfam 274 335

No CAZYmes available for this sequence

No external refs found!