LOC_Os04g53200.1

Description : Polynucleotidyl transferase, ribonuclease H-like superfamily protein

Gene families : OG_01_0003376 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003376_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g53200.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g53200.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_52
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_98

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008408	3'-5' exonuclease activity	ISM	GOs from InterProScan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036397	RNaseH_sf	Gene3D	59	244
IPR040393	TREX1/2	PANTHER	3	52
IPR040393	TREX1/2	PANTHER	55	253
IPR013520	Exonuclease_RNaseT/DNA_pol3	Pfam	63	232
IPR012337	RNaseH-like_sf	SUPERFAMILY	59	247
IPR013520	Exonuclease_RNaseT/DNA_pol3	SMART	61	241

No CAZYmes available for this sequence

External Links

No external refs found!