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  5. LOC_Os04g53770.1

LOC_Os04g53770.1


Description : ARM repeat superfamily protein


Gene families : OG_01_0004479 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004479_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g53770.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g53770.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_60
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_19


Type GO Term Name Evidence Source
BP GO:0000055 ribosomal large subunit export from nucleus ISM GOs from InterProScan
BP GO:0042273 ribosomal large subunit biogenesis ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016024 ARM-type_fold SUPERFAMILY 86 484
IPR012977 SDA1_N Pfam 88 139
IPR007949 SDA1_MD Pfam 447 834
IPR027312 Sda1 PANTHER 25 597
IPR027312 Sda1 PANTHER 581 837

No CAZYmes available for this sequence

No external refs found!