LOC_Os04g54070.1

Description : receptor kinase 3

Gene families : OG_01_0000022 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000022_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g54070.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g54070.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_146
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_87

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	ISM	GOs from InterProScan
MF	GO:0004674	protein serine/threonine kinase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006468	protein phosphorylation	ISM	GOs from InterProScan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008037	cell recognition	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048544	recognition of pollen	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001480	Bulb-type_lectin_dom	ProSiteProfiles	40	160
IPR001480	Bulb-type_lectin_dom	Pfam	88	189
IPR003609	Pan_app	SMART	359	439
IPR000858	S_locus_glycoprot_dom	Pfam	221	333
IPR036426	Bulb-type_lectin_dom_sf	Gene3D	35	160
IPR003609	Pan_app	ProSiteProfiles	355	440
IPR001480	Bulb-type_lectin_dom	CDD	49	163
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	506	865
IPR000719	Prot_kinase_dom	ProSiteProfiles	523	857
IPR000719	Prot_kinase_dom	SMART	523	815
IPR003609	Pan_app	Pfam	355	426
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	Pfam	527	839
IPR036426	Bulb-type_lectin_dom_sf	SUPERFAMILY	78	194
IPR024171	SRK-like_kinase	PIRSF	650	887
IPR024171	SRK-like_kinase	PIRSF	13	622
IPR008271	Ser/Thr_kinase_AS	ProSitePatterns	693	705
IPR017441	Protein_kinase_ATP_BS	ProSitePatterns	529	551
IPR001480	Bulb-type_lectin_dom	SMART	46	163

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os04g54070.1

Expression Profile

Co-expression Networks

Functional Annotation