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  5. LOC_Os04g54390.1

LOC_Os04g54390.1


Description : bifunctional nuclease i


Gene families : OG_01_0017937 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017937_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g54390.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g54390.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_234
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_152


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0004519 endonuclease activity ISM GOs from InterProScan
BP GO:0006308 DNA catabolic process ISM GOs from InterProScan
MF GO:0016788 hydrolase activity, acting on ester bonds ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008947 PLipase_C/P1_nuclease_dom_sf SUPERFAMILY 30 293
IPR003154 S1/P1nuclease PANTHER 9 301
IPR003154 S1/P1nuclease CDD 30 294
IPR008947 PLipase_C/P1_nuclease_dom_sf Gene3D 30 303
IPR003154 S1/P1nuclease Pfam 30 294

No CAZYmes available for this sequence

No external refs found!