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  5. LOC_Os04g54440.3

LOC_Os04g54440.3


Description : UBP1-associated protein 2A


Gene families : OG_01_0005257 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005257_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g54440.3
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g54440.3
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_52
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_19


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035979 RBD_domain_sf SUPERFAMILY 209 315
IPR035979 RBD_domain_sf SUPERFAMILY 103 207
IPR000504 RRM_dom SMART 115 187
IPR000504 RRM_dom SMART 231 303
IPR000504 RRM_dom Pfam 232 298
IPR000504 RRM_dom Pfam 116 174
IPR000504 RRM_dom ProSiteProfiles 230 309
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 58 196
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 197 321
IPR000504 RRM_dom ProSiteProfiles 114 191

No CAZYmes available for this sequence

No external refs found!