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  5. LOC_Os04g55210.1

LOC_Os04g55210.1


Description : Voltage-gated chloride channel family protein


Gene families : OG_01_0004941 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004941_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g55210.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g55210.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_353
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_128


Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity ISM GOs from InterProScan
BP GO:0006821 chloride transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001807 Cl-channel_volt-gated Pfam 166 580
IPR001807 Cl-channel_volt-gated PRINTS 548 567
IPR001807 Cl-channel_volt-gated PRINTS 586 600
IPR001807 Cl-channel_volt-gated PRINTS 273 292
IPR001807 Cl-channel_volt-gated PRINTS 498 518
IPR001807 Cl-channel_volt-gated PRINTS 530 546
IPR001807 Cl-channel_volt-gated PRINTS 209 228
IPR001807 Cl-channel_volt-gated PRINTS 178 195
IPR014743 Cl-channel_core SUPERFAMILY 87 601
IPR000644 CBS_dom Pfam 728 776
IPR002251 Cl_channel_pln PRINTS 294 302
IPR002251 Cl_channel_pln PRINTS 308 318
IPR002251 Cl_channel_pln PRINTS 326 333
IPR002251 Cl_channel_pln PRINTS 450 466
IPR002251 Cl_channel_pln PRINTS 83 91
IPR000644 CBS_dom ProSiteProfiles 727 787

No CAZYmes available for this sequence

No external refs found!