1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g55650.1

LOC_Os04g55650.1


Description : Granulin repeat cysteine protease family protein


Gene families : OG_01_0009190 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009190_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g55650.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g55650.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_309
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_108


Type GO Term Name Evidence Source
BP GO:0006508 proteolysis ISM GOs from InterProScan
MF GO:0008234 cysteine-type peptidase activity ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR025661 Pept_asp_AS ProSitePatterns 108 127
IPR000118 Granulin Pfam 182 229
IPR025660 Pept_his_AS ProSitePatterns 91 101
IPR039417 Peptidase_C1A_papain-like CDD 1 147
IPR037277 Granulin_sf Gene3D 168 230
IPR000118 Granulin SMART 171 228
IPR000668 Peptidase_C1A_C SMART 1 148
IPR000668 Peptidase_C1A_C Pfam 1 147
IPR038765 Papain-like_cys_pep_sf SUPERFAMILY 1 165

No CAZYmes available for this sequence

No external refs found!