LOC_Os04g57190.1

Description : ubiquitin C-terminal hydrolase 3

Gene families : OG_01_0002845 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002845_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g57190.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g57190.1	No neighbors in network
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_375

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	ISM	GOs from InterProScan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001578	Peptidase_C12_UCH	Pfam	20	222
IPR038765	Papain-like_cys_pep_sf	SUPERFAMILY	19	238
IPR001578	Peptidase_C12_UCH	PRINTS	60	72
IPR001578	Peptidase_C12_UCH	PRINTS	101	118
IPR001578	Peptidase_C12_UCH	PRINTS	173	184
IPR001578	Peptidase_C12_UCH	PRINTS	189	199
IPR001578	Peptidase_C12_UCH	PRINTS	22	39
IPR001578	Peptidase_C12_UCH	PANTHER	11	239
IPR036959	Peptidase_C12_UCH_sf	Gene3D	15	239

No CAZYmes available for this sequence

External Links

No external refs found!