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  5. LOC_Os04g58020.1

LOC_Os04g58020.1


Description : Duplicated homeodomain-like superfamily protein


Gene families : OG_01_0007467 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007467_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g58020.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g58020.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_380
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_19


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001005 SANT/Myb SMART 271 321
IPR001005 SANT/Myb SMART 158 213
IPR006447 Myb_dom_plants TIGRFAM 271 321
IPR009057 Homeobox-like_sf SUPERFAMILY 161 217
IPR017930 Myb_dom Pfam 274 318
IPR017884 SANT_dom ProSiteProfiles 275 323
IPR001005 SANT/Myb CDD 274 319
IPR001005 SANT/Myb ProSiteProfiles 267 319
IPR001005 SANT/Myb ProSiteProfiles 160 211
IPR001005 SANT/Myb CDD 162 211
IPR009057 Homeobox-like_sf SUPERFAMILY 269 324
IPR017930 Myb_dom ProSiteProfiles 267 323

No CAZYmes available for this sequence

No external refs found!