LOC_Os04g58550.1

Description : acyl-CoA binding protein 2

Gene families : OG_01_0008707 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008707_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g58550.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g58550.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_275
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_210

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	ISM	GOs from InterProScan
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0008289	lipid binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0033218	amide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0120227	acyl-CoA binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1901567	fatty acid derivative binding	None	Extended
MF	GO:1901681	sulfur compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002110	Ankyrin_rpt	PRINTS	300	314
IPR002110	Ankyrin_rpt	PRINTS	252	267
IPR036770	Ankyrin_rpt-contain_sf	Gene3D	289	327
IPR000582	Acyl-CoA-binding_protein	PRINTS	155	172
IPR000582	Acyl-CoA-binding_protein	PRINTS	111	129
IPR000582	Acyl-CoA-binding_protein	PRINTS	134	149
IPR014352	FERM/acyl-CoA-bd_prot_sf	Gene3D	84	194
IPR036770	Ankyrin_rpt-contain_sf	SUPERFAMILY	222	325
IPR002110	Ankyrin_rpt	Pfam	224	315
IPR002110	Ankyrin_rpt	ProSiteProfiles	251	283
IPR000582	Acyl-CoA-binding_protein	Pfam	91	168
IPR002110	Ankyrin_rpt	SMART	251	280
IPR002110	Ankyrin_rpt	SMART	284	313
IPR000582	Acyl-CoA-binding_protein	ProSiteProfiles	90	178
IPR035984	Acyl-CoA-binding_sf	SUPERFAMILY	89	176
IPR036770	Ankyrin_rpt-contain_sf	Gene3D	211	288
IPR002110	Ankyrin_rpt	ProSiteProfiles	284	316

No CAZYmes available for this sequence

External Links

No external refs found!