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  5. LOC_Os04g59130.1

LOC_Os04g59130.1


Description : tubby like protein 10


Gene families : OG_01_0012316 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012316_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g59130.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g59130.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_294
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_51


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000007 Tubby_C Pfam 117 457
IPR001810 F-box_dom Pfam 56 105
IPR018066 Tubby_C_CS ProSitePatterns 363 376
IPR025659 Tubby-like_C Gene3D 115 456
IPR000007 Tubby_C PRINTS 188 212
IPR000007 Tubby_C PRINTS 419 438
IPR000007 Tubby_C PRINTS 172 188
IPR000007 Tubby_C PRINTS 238 265
IPR000007 Tubby_C PRINTS 440 462
IPR000007 Tubby_C PRINTS 363 379
IPR000007 Tubby_C PRINTS 345 362
IPR018066 Tubby_C_CS ProSitePatterns 447 462
IPR025659 Tubby-like_C SUPERFAMILY 105 462
IPR036047 F-box-like_dom_sf SUPERFAMILY 48 100

No CAZYmes available for this sequence

No external refs found!