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  5. LOC_Os04g59370.1

LOC_Os04g59370.1


Description : Pathogenesis-related thaumatin superfamily protein


Gene families : OG_01_0018200 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0018200_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g59370.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g59370.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_38
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_181


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001938 Thaumatin PRINTS 227 236
IPR001938 Thaumatin PRINTS 51 60
IPR001938 Thaumatin PRINTS 119 135
IPR001938 Thaumatin PRINTS 27 39
IPR001938 Thaumatin PRINTS 72 83
IPR001938 Thaumatin PRINTS 85 114
IPR001938 Thaumatin SMART 28 237
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 27 236
IPR001938 Thaumatin Pfam 32 236
IPR001938 Thaumatin PIRSF 1 278
IPR037176 Osmotin/thaumatin-like_sf Gene3D 27 236
IPR001938 Thaumatin ProSiteProfiles 25 236
IPR001938 Thaumatin PANTHER 6 251
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 279 2.1e-82 32 236
No external refs found!