LOC_Os05g01360.1

Description : Vacuolar sorting protein 39

Gene families : OG_01_0004331 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004331_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g01360.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g01360.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_267
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_164

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR019452	VPS39/TGF_beta_rcpt-assoc_1	Pfam	489	557
IPR001180	CNH_dom	ProSiteProfiles	31	297
IPR001180	CNH_dom	Pfam	134	282
IPR032914	Vam6/VPS39/TRAP1	PANTHER	11	924
IPR019453	VPS39/TGF_beta_rcpt-assoc_2	Pfam	802	909

No CAZYmes available for this sequence

External Links

No external refs found!