LOC_Os05g01450.1

Description : eukaryotic translation initiation factor 2

Gene families : OG_01_0011863 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011863_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g01450.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g01450.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_233
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_110

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	ISM	GOs from InterProScan
BP	GO:0006413	translational initiation	ISM	GOs from InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
MF	GO:0031369	translation initiation factor binding	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0070122	obsolete isopeptidase activity	ISM	GOs from InterProScan
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140492	metal-dependent deubiquitinase activity	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR027531	eIF3f	Hamap	17	280
IPR024969	EIF3F/CSN6-like_C	Pfam	171	277
IPR027531	eIF3f	PANTHER	12	283
IPR000555	JAMM/MPN+_dom	Pfam	16	123
IPR000555	JAMM/MPN+_dom	SMART	18	149
IPR037518	MPN	ProSiteProfiles	19	150
IPR027531	eIF3f	CDD	20	277

No CAZYmes available for this sequence

External Links

No external refs found!