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  5. LOC_Os05g01460.1

LOC_Os05g01460.1


Description : carboxyl terminus of HSC70-interacting protein


Gene families : OG_01_0008850 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008850_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g01460.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g01460.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_374
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_136


Type GO Term Name Evidence Source
BP GO:0000209 protein polyubiquitination ISM GOs from InterProScan
MF GO:0004842 ubiquitin-protein transferase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
MF GO:0061630 ubiquitin protein ligase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003613 Ubox_domain Pfam 255 327
IPR045202 CHIP_RING-Ubox CDD 255 321
IPR011990 TPR-like_helical_dom_sf Gene3D 64 198
IPR013083 Znf_RING/FYVE/PHD Gene3D 253 331
IPR003613 Ubox_domain SMART 258 321
IPR019734 TPR_repeat SMART 136 169
IPR019734 TPR_repeat SMART 68 101
IPR019734 TPR_repeat SMART 102 135
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 68 169
IPR003613 Ubox_domain ProSiteProfiles 254 328

No CAZYmes available for this sequence

No external refs found!