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  5. LOC_Os05g01560.1

LOC_Os05g01560.1


Description : vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4


Gene families : OG_01_0000711 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000711_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g01560.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g01560.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_93
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_212


Type GO Term Name Evidence Source
MF GO:0015078 proton transmembrane transporter activity ISM GOs from InterProScan
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain ISM GOs from InterProScan
CC GO:0033179 proton-transporting V-type ATPase, V0 domain ISM GOs from InterProScan
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism ISM GOs from InterProScan
BP GO:1902600 proton transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035921 F/V-ATP_Csub_sf Gene3D 12 163
IPR035921 F/V-ATP_Csub_sf SUPERFAMILY 14 78
IPR000245 ATPase_proteolipid_csu PRINTS 31 55
IPR000245 ATPase_proteolipid_csu PRINTS 57 81
IPR000245 ATPase_proteolipid_csu PRINTS 135 158
IPR000245 ATPase_proteolipid_csu PRINTS 108 134
IPR035921 F/V-ATP_Csub_sf SUPERFAMILY 88 157
IPR002379 ATPase_proteolipid_c-like_dom Pfam 98 156
IPR002379 ATPase_proteolipid_c-like_dom Pfam 18 77
IPR011555 ATPase_proteolipid_su_C_euk TIGRFAM 14 122

No CAZYmes available for this sequence

No external refs found!