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  5. LOC_Os05g02130.1

LOC_Os05g02130.1


Description : XB3 ortholog 1 in Arabidopsis thaliana


Gene families : OG_01_0000649 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000649_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g02130.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g02130.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_92
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_125


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002110 Ankyrin_rpt Pfam 196 221
IPR002110 Ankyrin_rpt ProSiteProfiles 158 190
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 17 251
IPR001841 Znf_RING ProSiteProfiles 323 372
IPR002110 Ankyrin_rpt ProSiteProfiles 46 78
IPR002110 Ankyrin_rpt ProSiteProfiles 195 227
IPR036770 Ankyrin_rpt-contain_sf Gene3D 112 193
IPR002110 Ankyrin_rpt ProSiteProfiles 79 111
IPR013083 Znf_RING/FYVE/PHD Gene3D 305 381
IPR002110 Ankyrin_rpt Pfam 114 183
IPR002110 Ankyrin_rpt Pfam 17 108
IPR036770 Ankyrin_rpt-contain_sf Gene3D 194 256
IPR002110 Ankyrin_rpt SMART 46 75
IPR002110 Ankyrin_rpt SMART 11 40
IPR002110 Ankyrin_rpt SMART 79 108
IPR002110 Ankyrin_rpt SMART 158 187
IPR002110 Ankyrin_rpt SMART 195 224
IPR002110 Ankyrin_rpt SMART 113 142
IPR036770 Ankyrin_rpt-contain_sf Gene3D 6 111

No CAZYmes available for this sequence

No external refs found!