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  5. LOC_Os05g03480.2

LOC_Os05g03480.2


Description : isovaleryl-CoA-dehydrogenase


Gene families : OG_01_0007423 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007423_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g03480.2
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g03480.2
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_93
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_159


Type GO Term Name Evidence Source
MF GO:0003995 acyl-CoA dehydrogenase activity ISM GOs from InterProScan
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors ISM GOs from InterProScan
MF GO:0050660 flavin adenine dinucleotide binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR009100 AcylCoA_DH/oxidase_NM_dom_sf SUPERFAMILY 28 268
IPR037069 AcylCoA_DH/ox_N_sf Gene3D 24 147
IPR009075 AcylCo_DH/oxidase_C Pfam 257 405
IPR036250 AcylCo_DH-like_C SUPERFAMILY 255 408
IPR034183 IVD CDD 31 407
IPR006089 Acyl-CoA_DH_CS ProSitePatterns 364 383
IPR006091 Acyl-CoA_Oxase/DH_mid-dom Pfam 150 245
IPR013786 AcylCoA_DH/ox_N Pfam 33 146
IPR006089 Acyl-CoA_DH_CS ProSitePatterns 152 164

No CAZYmes available for this sequence

No external refs found!