1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g03910.1

LOC_Os05g03910.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0009867 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009867_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g03910.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g03910.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_54
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_1


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 27 138
IPR019734 TPR_repeat SMART 107 140
IPR019734 TPR_repeat SMART 40 73
IPR019734 TPR_repeat SMART 74 106
IPR019734 TPR_repeat Pfam 75 103
IPR019734 TPR_repeat Pfam 47 71
IPR025986 RPAP3-like_C Pfam 265 353
IPR019734 TPR_repeat ProSiteProfiles 40 73
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 40 150

No CAZYmes available for this sequence

No external refs found!