LOC_Os05g04510.1

Description : S-adenosylmethionine synthetase 1

Gene families : OG_01_0000678 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000678_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g04510.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g04510.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_179

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004478	methionine adenosyltransferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006556	S-adenosylmethionine biosynthetic process	ISM	GOs from InterProScan
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0046500	S-adenosylmethionine metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR022636	S-AdoMet_synthetase_sfam	SUPERFAMILY	6	112
IPR002133	S-AdoMet_synthetase	PIRSF	1	395
IPR022636	S-AdoMet_synthetase_sfam	SUPERFAMILY	118	242
IPR022631	ADOMET_SYNTHASE_CS	ProSitePatterns	269	277
IPR002133	S-AdoMet_synthetase	TIGRFAM	8	389
IPR022628	S-AdoMet_synt_N	Pfam	7	104
IPR022630	S-AdoMet_synt_C	Pfam	243	384
IPR002133	S-AdoMet_synthetase	Hamap	5	396
IPR022629	S-AdoMet_synt_central	Pfam	120	241
IPR022631	ADOMET_SYNTHASE_CS	ProSitePatterns	122	132
IPR002133	S-AdoMet_synthetase	PANTHER	1	396
IPR022636	S-AdoMet_synthetase_sfam	SUPERFAMILY	243	392

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os05g04510.1

Expression Profile

Co-expression Networks

Functional Annotation