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  5. LOC_Os05g05170.1

LOC_Os05g05170.1


Description : Mannose-binding lectin superfamily protein


Gene families : OG_01_0000506 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000506_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g05170.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g05170.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_84
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_51


Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036404 Jacalin-like_lectin_dom_sf Gene3D 3 152
IPR033734 Jacalin-like_lectin_dom_plant CDD 25 151
IPR001229 Jacalin-like_lectin_dom Pfam 38 152
IPR001229 Jacalin-like_lectin_dom ProSiteProfiles 4 152
IPR001229 Jacalin-like_lectin_dom SMART 25 152
IPR036404 Jacalin-like_lectin_dom_sf SUPERFAMILY 3 152

No CAZYmes available for this sequence

No external refs found!