LOC_Os05g06350.1

Description : importin alpha isoform 1

Gene families : OG_01_0001840 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001840_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g06350.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g06350.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_315
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_34

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	GOs from InterProScan
BP	GO:0006606	protein import into nucleus	ISM	GOs from InterProScan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0061608	nuclear import signal receptor activity	ISM	GOs from InterProScan
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140104	molecular carrier activity	None	Extended
MF	GO:0140142	nucleocytoplasmic carrier activity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011989	ARM-like	Gene3D	78	500
IPR000225	Armadillo	ProSiteProfiles	121	164
IPR032413	Arm_3	Pfam	461	506
IPR002652	Importin-a_IBB	ProSiteProfiles	1	58
IPR000225	Armadillo	ProSiteProfiles	248	290
IPR024931	Importin_alpha	PIRSF	2	533
IPR000225	Armadillo	ProSiteProfiles	164	206
IPR002652	Importin-a_IBB	Pfam	12	100
IPR000225	Armadillo	SMART	407	447
IPR000225	Armadillo	SMART	364	404
IPR000225	Armadillo	SMART	110	151
IPR000225	Armadillo	SMART	153	193
IPR000225	Armadillo	SMART	195	236
IPR000225	Armadillo	SMART	238	277
IPR000225	Armadillo	SMART	321	362
IPR000225	Armadillo	SMART	279	319
IPR000225	Armadillo	Pfam	364	403
IPR000225	Armadillo	Pfam	322	362
IPR000225	Armadillo	Pfam	195	236
IPR000225	Armadillo	Pfam	111	151
IPR000225	Armadillo	Pfam	280	318
IPR000225	Armadillo	Pfam	153	192
IPR000225	Armadillo	Pfam	249	276
IPR000225	Armadillo	Pfam	408	445
IPR016024	ARM-type_fold	SUPERFAMILY	13	504
IPR036975	Importin-a_IBB_sf	Gene3D	11	50

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os05g06350.1

Expression Profile

Co-expression Networks

Functional Annotation