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  5. LOC_Os05g07180.1

LOC_Os05g07180.1


Description : Trypsin family protein with PDZ domain


Gene families : OG_01_0017651 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017651_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g07180.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g07180.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_110
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_149


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001478 PDZ Pfam 420 472
IPR036034 PDZ_sf SUPERFAMILY 420 472
IPR036034 PDZ_sf Gene3D 401 515
IPR009003 Peptidase_S1_PA SUPERFAMILY 205 389

No CAZYmes available for this sequence

No external refs found!