LOC_Os05g10630.1

Description : Actin-like ATPase superfamily protein

Gene families : OG_01_0010469 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010469_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g10630.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g10630.1	No neighbors in network
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_295

Type	GO Term	Name	Evidence	Source
CC	GO:0000408	EKC/KEOPS complex	ISM	GOs from InterProScan
BP	GO:0002949	tRNA threonylcarbamoyladenosine modification	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0070525	tRNA threonylcarbamoyladenosine metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000905	Gcp-like_dom	PANTHER	76	410
IPR034680	Kae1_archaea_euk	PANTHER	76	410
IPR043129	ATPase_NBD	SUPERFAMILY	76	375
IPR000905	Gcp-like_dom	Pfam	99	375
IPR017861	KAE1/TsaD	TIGRFAM	78	374
IPR017861	KAE1/TsaD	PRINTS	331	340
IPR017861	KAE1/TsaD	PRINTS	148	168
IPR017861	KAE1/TsaD	PRINTS	223	244
IPR017861	KAE1/TsaD	PRINTS	201	213
IPR017861	KAE1/TsaD	PRINTS	169	188
IPR017861	KAE1/TsaD	PRINTS	78	91
IPR017860	Peptidase_M22_CS	ProSitePatterns	168	188
IPR034680	Kae1_archaea_euk	Hamap	75	408

No CAZYmes available for this sequence

External Links

No external refs found!