LOC_Os05g10730.1

Description : multidrug resistance-associated protein 6

Gene families : OG_01_0008348 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008348_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g10730.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g10730.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_204
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_86

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140359	ABC-type transporter activity	ISM	GOs from InterProScan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036640	ABC1_TM_sf	Gene3D	896	1226
IPR027417	P-loop_NTPase	SUPERFAMILY	631	854
IPR003439	ABC_transporter-like_ATP-bd	ProSiteProfiles	1245	1479
IPR011527	ABC1_TM_dom	ProSiteProfiles	928	1208
IPR011527	ABC1_TM_dom	Pfam	935	1194
IPR011527	ABC1_TM_dom	Pfam	352	583
IPR036640	ABC1_TM_sf	Gene3D	301	615
IPR044726	ABCC_6TM_D2	CDD	927	1220
IPR036640	ABC1_TM_sf	SUPERFAMILY	302	604
IPR027417	P-loop_NTPase	Gene3D	1228	1480
IPR027417	P-loop_NTPase	SUPERFAMILY	1235	1475
IPR003439	ABC_transporter-like_ATP-bd	ProSiteProfiles	631	854
IPR003593	AAA+_ATPase	SMART	1271	1464
IPR003593	AAA+_ATPase	SMART	658	831
IPR044746	ABCC_6TM_D1	CDD	329	604
IPR003439	ABC_transporter-like_ATP-bd	Pfam	1262	1410
IPR036640	ABC1_TM_sf	SUPERFAMILY	920	1225
IPR017871	ABC_transporter-like_CS	ProSitePatterns	756	770
IPR003439	ABC_transporter-like_ATP-bd	Pfam	649	783
IPR011527	ABC1_TM_dom	ProSiteProfiles	314	596
IPR027417	P-loop_NTPase	Gene3D	623	874

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os05g10730.1

Expression Profile

Co-expression Networks

Functional Annotation