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  5. LOC_Os05g12140.1

LOC_Os05g12140.1


Description : Leucine-rich repeat (LRR) family protein


Gene families : OG_01_0006319 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006319_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g12140.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g12140.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_188
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_187


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR032675 LRR_dom_sf Gene3D 239 331
IPR001611 Leu-rich_rpt Pfam 151 171
IPR001611 Leu-rich_rpt Pfam 125 147
IPR001611 Leu-rich_rpt Pfam 362 382
IPR032675 LRR_dom_sf Gene3D 332 406
IPR032675 LRR_dom_sf Gene3D 26 156
IPR032675 LRR_dom_sf Gene3D 157 238
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 124 149
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 173 197
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 311 335
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 361 385
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 336 360
IPR032675 LRR_dom_sf Gene3D 407 596

No CAZYmes available for this sequence

No external refs found!