Sevir.4G211200.1

Description : proteasome beta subunit C1

Gene families : OG_01_0008537 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008537_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G211200.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G211200.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_22
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_39

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	ISM	GOs from InterProScan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0019774	proteasome core complex, beta-subunit complex	ISM	GOs from InterProScan
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	ISM	GOs from InterProScan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	ISM	GOs from InterProScan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001353	Proteasome_sua/b	Pfam	7	189
IPR029055	Ntn_hydrolases_N	SUPERFAMILY	4	204
IPR016050	Proteasome_bsu_CS	ProSitePatterns	12	59
IPR029055	Ntn_hydrolases_N	Gene3D	1	204
IPR033811	Proteasome_beta_3	CDD	6	200
IPR023333	Proteasome_suB-type	ProSiteProfiles	8	189

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.4G211200.1

Expression Profile

Co-expression Networks

Functional Annotation