LOC_Os05g22940.1

Description : acetyl-CoA carboxylase 2

Gene families : OG_01_0000499 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000499_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g22940.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g22940.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_315
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_152

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003989	acetyl-CoA carboxylase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016421	CoA carboxylase activity	None	Extended
MF	GO:0016874	ligase activity	ISM	GOs from InterProScan
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011054	Rudment_hybrid_motif	SUPERFAMILY	612	725
IPR011763	COA_CT_C	ProSiteProfiles	2000	2314
IPR029045	ClpP/crotonase-like_dom_sf	SUPERFAMILY	1661	1985
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	ProSitePatterns	535	542
IPR005482	Biotin_COase_C	SMART	617	724
IPR013537	AcCoA_COase_cen	Pfam	929	1648
IPR011761	ATP-grasp	ProSiteProfiles	374	568
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	Pfam	389	571
IPR016185	PreATP-grasp_dom_sf	SUPERFAMILY	191	344
IPR011762	COA_CT_N	ProSiteProfiles	1655	1996
IPR011053	Single_hybrid_motif	SUPERFAMILY	861	931
IPR000089	Biotin_lipoyl	Pfam	872	928
IPR000089	Biotin_lipoyl	ProSiteProfiles	855	929
IPR029045	ClpP/crotonase-like_dom_sf	SUPERFAMILY	1990	2376
IPR034733	AcCoA_carboxyl_beta	Pfam	1752	2303
IPR005482	Biotin_COase_C	Pfam	618	724
IPR005481	BC-like_N	Pfam	222	341
IPR011764	Biotin_carboxylation_dom	ProSiteProfiles	221	728
IPR013815	ATP_grasp_subdomain_1	Gene3D	389	451

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os05g22940.1

Expression Profile

Co-expression Networks

Functional Annotation