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  5. LOC_Os05g23430.2

LOC_Os05g23430.2


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0010821 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010821_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g23430.2
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g23430.2
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_342
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_228


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 54 87
IPR001680 WD40_rpt SMART 47 86
IPR001680 WD40_rpt SMART 141 179
IPR001680 WD40_rpt SMART 3 44
IPR001680 WD40_rpt ProSiteProfiles 147 181
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 96 181
IPR024977 Apc4-like_WD40_dom Pfam 18 64
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 3 177
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1 95
IPR001680 WD40_rpt Pfam 145 177

No CAZYmes available for this sequence

No external refs found!