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  5. LOC_Os05g23620.1

LOC_Os05g23620.1


Description : Cytochrome C1 family


Gene families : OG_01_0013043 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013043_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g23620.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g23620.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_85
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_58


Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity ISM GOs from InterProScan
MF GO:0020037 heme binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002326 Cyt_c1 Pfam 75 291
IPR021157 Cyt_c1_TM_anchor_C SUPERFAMILY 259 303
IPR036909 Cyt_c-like_dom_sf Gene3D 64 259
IPR009056 Cyt_c-like_dom ProSiteProfiles 87 239
IPR002326 Cyt_c1 PRINTS 171 195
IPR002326 Cyt_c1 PRINTS 73 92
IPR002326 Cyt_c1 PRINTS 220 239
IPR002326 Cyt_c1 PRINTS 240 259
IPR002326 Cyt_c1 PRINTS 209 220
IPR002326 Cyt_c1 PRINTS 93 112
IPR002326 Cyt_c1 PRINTS 138 158
IPR002326 Cyt_c1 PRINTS 259 274
IPR002326 Cyt_c1 PANTHER 1 304
IPR036909 Cyt_c-like_dom_sf SUPERFAMILY 68 258

No CAZYmes available for this sequence

No external refs found!