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  5. LOC_Os05g24550.1

LOC_Os05g24550.1


Description : Cysteine proteinases superfamily protein


Gene families : OG_01_0002542 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002542_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g24550.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g24550.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_310
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_221


Type GO Term Name Evidence Source
BP GO:0006508 proteolysis ISM GOs from InterProScan
MF GO:0008234 cysteine-type peptidase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR038765 Papain-like_cys_pep_sf SUPERFAMILY 164 414
IPR000668 Peptidase_C1A_C SMART 178 413
IPR000668 Peptidase_C1A_C Pfam 178 412
IPR025660 Pept_his_AS ProSitePatterns 359 369
IPR000169 Pept_cys_AS ProSitePatterns 200 211
IPR000668 Peptidase_C1A_C PRINTS 377 383
IPR000668 Peptidase_C1A_C PRINTS 200 215
IPR000668 Peptidase_C1A_C PRINTS 361 371

No CAZYmes available for this sequence

No external refs found!