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  5. LOC_Os05g25850.1

LOC_Os05g25850.1


Description : manganese superoxide dismutase 1


Gene families : OG_01_0013448 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013448_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g25850.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g25850.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_261
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_166


Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity ISM GOs from InterProScan
BP GO:0006801 superoxide metabolic process ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019832 Mn/Fe_SOD_C Pfam 121 222
IPR036314 SOD_C_sf Gene3D 112 230
IPR001189 Mn/Fe_SOD PRINTS 34 45
IPR001189 Mn/Fe_SOD PRINTS 150 158
IPR001189 Mn/Fe_SOD PRINTS 55 68
IPR001189 Mn/Fe_SOD PRINTS 94 107
IPR001189 Mn/Fe_SOD PRINTS 190 202
IPR019833 Mn/Fe_SOD_BS ProSitePatterns 192 199
IPR001189 Mn/Fe_SOD PIRSF 4 231
IPR019831 Mn/Fe_SOD_N Pfam 32 111
IPR036324 Mn/Fe_SOD_N_sf SUPERFAMILY 28 112
IPR036324 Mn/Fe_SOD_N_sf Gene3D 48 111
IPR036314 SOD_C_sf SUPERFAMILY 116 229

No CAZYmes available for this sequence

No external refs found!