Sevir.4G214500.5

Description : Zinc finger C-x8-C-x5-C-x3-H type family protein

Gene families : OG_01_0004550 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004550_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G214500.5
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G214500.5
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_92
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_118

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000571	Znf_CCCH	ProSiteProfiles	1803	1829
IPR000571	Znf_CCCH	ProSiteProfiles	1830	1857
IPR000571	Znf_CCCH	SMART	1748	1776
IPR000571	Znf_CCCH	SMART	1777	1801
IPR000571	Znf_CCCH	SMART	1830	1856
IPR000571	Znf_CCCH	SMART	1803	1828
IPR000571	Znf_CCCH	SMART	1857	1879
IPR000571	Znf_CCCH	ProSiteProfiles	1748	1777

No CAZYmes available for this sequence

External Links

No external refs found!