LOC_Os05g33500.1

Description : Mitochondrial transcription termination factor family protein

Gene families : OG_01_0016211 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016211_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g33500.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g33500.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_245
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_152

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003690	MTERF	SMART	198	229
IPR003690	MTERF	SMART	378	409
IPR003690	MTERF	SMART	306	338
IPR003690	MTERF	SMART	270	301
IPR003690	MTERF	SMART	343	373
IPR003690	MTERF	SMART	126	157
IPR003690	MTERF	SMART	410	441
IPR003690	MTERF	SMART	234	265
IPR003690	MTERF	SMART	162	193
IPR003690	MTERF	Pfam	148	455
IPR003690	MTERF	PANTHER	53	487
IPR038538	MTERF_sf	Gene3D	129	250
IPR038538	MTERF_sf	Gene3D	251	463

No CAZYmes available for this sequence

External Links

No external refs found!