LOC_Os05g33760.1

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_01_0011187 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011187_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os05g33760.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os05g33760.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_385
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_38

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044179	PPR5-like	PANTHER	33	494
IPR002885	Pentatricopeptide_rpt	Pfam	358	381
IPR002885	Pentatricopeptide_rpt	Pfam	177	201
IPR002885	Pentatricopeptide_rpt	Pfam	246	292
IPR002885	Pentatricopeptide_rpt	TIGRFAM	248	280
IPR002885	Pentatricopeptide_rpt	ProSiteProfiles	245	279
IPR011990	TPR-like_helical_dom_sf	Gene3D	357	492
IPR011990	TPR-like_helical_dom_sf	Gene3D	190	311

No CAZYmes available for this sequence

External Links

No external refs found!